397 followers
"SquiggleNet operates faster than the DNA passes through thepore, allowing real-time classification and read ejection." https://t.co/w0LptKzZzV
218 followers
Real-Time, Direct Classification of Nanopore Signals with SquiggleNet https://t.co/g0LhsStUB7
3,799 followers
Real-Time, Direct Classification of Nanopore Signals with SquiggleNet https://t.co/eH4HASnOLv
272 followers
RT @robertpdickson: 👇 Insanely cool project: in nanopore sequencing, can you skip the basecalling and just directly determine whether DNA i…
1,110 followers
RT @robertpdickson: 👇 Insanely cool project: in nanopore sequencing, can you skip the basecalling and just directly determine whether DNA i…
25 followers
RT @LabWelch: In this preprint, we describe a CNN that @baobaoyaobaobao developed to classify raw electrical signals from MinION sequencing…
223 followers
I like this approach for agnostic life detection. Assuming you can get informational polymers to your pore to get a squiggle can you distinguish earth dna from hypothetical extraterrestrial dna-like molecules?
278 followers
RT @robertpdickson: 👇 Insanely cool project: in nanopore sequencing, can you skip the basecalling and just directly determine whether DNA i…
154 followers
RT @LabWelch: In this preprint, we describe a CNN that @baobaoyaobaobao developed to classify raw electrical signals from MinION sequencing…
554 followers
RT @robertpdickson: 👇 Insanely cool project: in nanopore sequencing, can you skip the basecalling and just directly determine whether DNA i…
554 followers
RT @LabWelch: In this preprint, we describe a CNN that @baobaoyaobaobao developed to classify raw electrical signals from MinION sequencing…
225 followers
RT @robertpdickson: 👇 Insanely cool project: in nanopore sequencing, can you skip the basecalling and just directly determine whether DNA i…
1,173 followers
RT @LabWelch: In this preprint, we describe a CNN that @baobaoyaobaobao developed to classify raw electrical signals from MinION sequencing…
516 followers
RT @LabWelch: In this preprint, we describe a CNN that @baobaoyaobaobao developed to classify raw electrical signals from MinION sequencing…
9,813 followers
RT @LabWelch: In this preprint, we describe a CNN that @baobaoyaobaobao developed to classify raw electrical signals from MinION sequencing…
1,712 followers
RT @LabWelch: In this preprint, we describe a CNN that @baobaoyaobaobao developed to classify raw electrical signals from MinION sequencing…
1,589 followers
RT @LabWelch: In this preprint, we describe a CNN that @baobaoyaobaobao developed to classify raw electrical signals from MinION sequencing…
950 followers
RT @robertpdickson: 👇 Insanely cool project: in nanopore sequencing, can you skip the basecalling and just directly determine whether DNA i…
753 followers
RT @robertpdickson: 👇 Insanely cool project: in nanopore sequencing, can you skip the basecalling and just directly determine whether DNA i…
1,333 followers
RT @robertpdickson: 👇 Insanely cool project: in nanopore sequencing, can you skip the basecalling and just directly determine whether DNA i…
212 followers
RT @robertpdickson: 👇 Insanely cool project: in nanopore sequencing, can you skip the basecalling and just directly determine whether DNA i…
2,857 followers
👇 Insanely cool project: in nanopore sequencing, can you skip the basecalling and just directly determine whether DNA is human/microbe by interrogating the "squiggle"? Basically, what Shazam does for songs, this does for host vs bug. https://t.co/uVSL7uCN
4,045 followers
Real-Time, Direct Classification of Nanopore Signals with SquiggleNet https://t.co/UwBwvd4xat
10,172 followers
RT @BiorxivB: Keywords (Artificial Intelligence OR deep learning OR machine learning) AND (RNA-seq OR RNAseq OR sequencing OR transcriptom)…
22 followers
Keywords (Artificial Intelligence OR deep learning OR machine learning) AND (RNA-seq OR RNAseq OR sequencing OR transcriptom) https://t.co/enX4i70S14
2,973 followers
RT @SeqComplete: #BioIT #BioInformatics Real-Time, Direct Classification of Nanopore Signals with SquiggleNet [NEW RESULTS] https://t.co/Ps…
4,689 followers
#BioIT #BioInformatics Real-Time, Direct Classification of Nanopore Signals with SquiggleNet [NEW RESULTS] https://t.co/PsiwnzKOtS
981 followers
In this preprint, we describe a CNN that @baobaoyaobaobao developed to classify raw electrical signals from MinION sequencing ("squiggles") in real time. SquiggleNet computationally enriches target sequences and beats basecalling+alignment. https://t.co/fr
642 followers
#bioRxiv Real-Time, Direct Classification of Nanopore Signals with SquiggleNet #bioinfo https://t.co/Ko002FQxtA
4,045 followers
Real-Time, Direct Classification of Nanopore Signals with SquiggleNet https://t.co/UwBwvd4xat
38 followers
RT @biorxiv_bioinfo: Real-Time, Direct Classification of Nanopore Signals with SquiggleNet https://t.co/dyfQ6yVGnT #biorxiv_bioinfo
2,060 followers
RT @SeqComplete: #BioIT #BioInformatics Real-Time, Direct Classification of Nanopore Signals with SquiggleNet [NEW RESULTS] https://t.co/nl…
161 followers
RT @razoralign: SquiggleNet: Real-Time, Direct Classification of Nanopore Signals https://t.co/X1UIFiCAtL https://t.co/ucetBOvrf2
4,881 followers
Real-Time, Direct Classification of Nanopore Signals with SquiggleNet. @nanopore https://t.co/cbnwArPFAq
152 followers
RT @biorxiv_bioinfo: Real-Time, Direct Classification of Nanopore Signals with SquiggleNet https://t.co/dyfQ6yVGnT #biorxiv_bioinfo
795 followers
RT @razoralign: SquiggleNet: Real-Time, Direct Classification of Nanopore Signals https://t.co/X1UIFiCAtL https://t.co/ucetBOvrf2
4,442 followers
RT @biorxiv_bioinfo: Real-Time, Direct Classification of Nanopore Signals with SquiggleNet https://t.co/dyfQ6yVGnT #biorxiv_bioinfo
3,416 followers
RT @razoralign: SquiggleNet: Real-Time, Direct Classification of Nanopore Signals https://t.co/X1UIFiCAtL https://t.co/ucetBOvrf2
1,566 followers
RT @razoralign: SquiggleNet: Real-Time, Direct Classification of Nanopore Signals https://t.co/X1UIFiCAtL https://t.co/ucetBOvrf2
4,442 followers
RT @razoralign: SquiggleNet: Real-Time, Direct Classification of Nanopore Signals https://t.co/X1UIFiCAtL https://t.co/ucetBOvrf2
12,568 followers
SquiggleNet: Real-Time, Direct Classification of Nanopore Signals https://t.co/X1UIFiCAtL https://t.co/ucetBOvrf2
1,430 followers
RT @biorxiv_bioinfo: Real-Time, Direct Classification of Nanopore Signals with SquiggleNet https://t.co/dyfQ6yVGnT #biorxiv_bioinfo
4,905 followers
RT @ilyavkirov: A tool for real-time read classification and ejection. Real-Time, Direct Classification of Nanopore Signals with SquiggleNe…
4,689 followers
#nanopores Real-Time, Direct Classification of Nanopore Signals with SquiggleNet | bioRxiv https://t.co/jptTdfErf7, see more https://t.co/QGcZ4oAz3B
22 followers
Keywords (Artificial Intelligence OR deep learning OR machine learning) AND (RNA-seq OR RNAseq OR sequencing OR transcriptom) https://t.co/Z3SSefE7QI
249 followers
I tried something like this long time ago and I have questions. First of all, accuracy is a bad metric, give me sensitivity and specificity. Lots of time the input would be unbalanced (if you have 50/50 human/target split, you do not care about target sequ
554 followers
RT @biorxiv_bioinfo: Real-Time, Direct Classification of Nanopore Signals with SquiggleNet https://t.co/dyfQ6yVGnT #biorxiv_bioinfo
867 followers
RT @SeqComplete: #BioIT #BioInformatics Real-Time, Direct Classification of Nanopore Signals with SquiggleNet [NEW RESULTS] https://t.co/nl…
4,442 followers
RT @SeqComplete: #BioIT #BioInformatics Real-Time, Direct Classification of Nanopore Signals with SquiggleNet [NEW RESULTS] https://t.co/nl…
2,973 followers
RT @SeqComplete: #BioIT #BioInformatics Real-Time, Direct Classification of Nanopore Signals with SquiggleNet [NEW RESULTS] https://t.co/nl…
4,689 followers
#BioIT #BioInformatics Real-Time, Direct Classification of Nanopore Signals with SquiggleNet [NEW RESULTS] https://t.co/nllLCPvt3Z
209 followers
RT @biorxiv_bioinfo: Real-Time, Direct Classification of Nanopore Signals with SquiggleNet https://t.co/dyfQ6yVGnT #biorxiv_bioinfo
973 followers
@MariacCedric
596 followers
RT @biorxiv_bioinfo: Real-Time, Direct Classification of Nanopore Signals with SquiggleNet https://t.co/dyfQ6yVGnT #biorxiv_bioinfo
369 followers
RT @biorxiv_bioinfo: Real-Time, Direct Classification of Nanopore Signals with SquiggleNet https://t.co/dyfQ6yVGnT #biorxiv_bioinfo
1,205 followers
A tool for real-time read classification and ejection. Real-Time, Direct Classification of Nanopore Signals with SquiggleNet https://t.co/2yXVYlEdNm
136 followers
RT @biorxivpreprint: Real-Time, Direct Classification of Nanopore Signals with SquiggleNet https://t.co/kpuYpVt9RT #bioRxiv
1,738 followers
another real-time classifier for nanopore. looks like they didn't deploy it on a sequencer, but i'm not sure how much that matters? i have a feeling this capability will be a really big deal for nanopore sequencers
15,036 followers
Real-Time, Direct Classification of Nanopore Signals with SquiggleNet https://t.co/dyfQ6yVGnT #biorxiv_bioinfo
126,149 followers
Real-Time, Direct Classification of Nanopore Signals with SquiggleNet https://t.co/kpuYpVt9RT #bioRxiv