Cookiecutter Data Science https://t.co/T0qQ1mrxnC Good enough practices in scientific computing https://t.co/uRThVDjMiv
RT @AMeynert: @thecarpentries Lab lesson on Good Enough Practices in Scientific Computing is out and ready for teaching. Super proud of thi…
RT @AMeynert: @thecarpentries Lab lesson on Good Enough Practices in Scientific Computing is out and ready for teaching. Super proud of thi…
RT @AMeynert: @thecarpentries Lab lesson on Good Enough Practices in Scientific Computing is out and ready for teaching. Super proud of thi…
RT @AMeynert: @thecarpentries Lab lesson on Good Enough Practices in Scientific Computing is out and ready for teaching. Super proud of thi…
RT @AMeynert: @thecarpentries Lab lesson on Good Enough Practices in Scientific Computing is out and ready for teaching. Super proud of thi…
@thecarpentries Lab lesson on Good Enough Practices in Scientific Computing is out and ready for teaching. Super proud of this @EdDaSH_Training effort spearheaded by @ewjwallace. Based on theWilson 2017 paper: https://t.co/xrW6FCKtLI https://t.co/DmvescuP
RT @tangming2005: 4. Good enough practices in scientific computing https://t.co/GgePa77F9C 5. Best Practices for Scientific Computing http…
4. Good enough practices in scientific computing https://t.co/GgePa77F9C 5. Best Practices for Scientific Computing https://t.co/rBKPgV7Onw If you want to learn computational biology, join my newsletter here https://t.co/gXCGKH7GdY
Good enough practices in scientific computing Authors: Greg Wilson, Jennifer Bryan, Karen Cranston, Justin Kitzes, Lex Nederbragt, Tracy K. Teal https://t.co/nX8PrXMyGp
RT @tangming2005: Use git to track your code, and I recently discovered scdataflow https://t.co/VkrN2mcLYu which can track the files as wel…
RT @tangming2005: Use git to track your code, and I recently discovered scdataflow https://t.co/VkrN2mcLYu which can track the files as wel…
Everyone of these papers is a must read for analysis of biological data
Use git to track your code, and I recently discovered scdataflow https://t.co/VkrN2mcLYu which can track the files as well. Also read Good enough practices in scientific computing https://t.co/GgePa77F9C and Best Practices for Scientific Computing https://
RT @Cghlewis: Still true 6 yrs later "Many funding agencies now require data-management plans.... The true cost of implementing these plans…
RT @Cghlewis: Still true 6 yrs later "Many funding agencies now require data-management plans.... The true cost of implementing these plans…
Still true 6 yrs later "Many funding agencies now require data-management plans.... The true cost of implementing these plans includes training; it is unfair as well as counterproductive to insist that researchers do things without teaching them how." htt
This is a good paper which you should read and re-read on a regular basis: https://t.co/odpOEVwIXe
incluso, una buena práctica para facilitar el *re-uso* de tu código es seguir "guías de estilo" incluso, usar aquellos paquetes provee puntos de control antes de cada contribución ver secciones de "software" y "keep track of changes" de este artículo 🍊
RT @RosanaFerrero: 🙌 ¡Optimiza tu investigación! 📚 Aprende buenas prácticas en computación científica 👀 💡 Gestión de datos, programación, c…
RT @RosanaFerrero: 🙌 ¡Optimiza tu investigación! 📚 Aprende buenas prácticas en computación científica 👀 💡 Gestión de datos, programación, c…
RT @RosanaFerrero: 🙌 ¡Optimiza tu investigación! 📚 Aprende buenas prácticas en computación científica 👀 💡 Gestión de datos, programación, c…
RT @RosanaFerrero: 🙌 ¡Optimiza tu investigación! 📚 Aprende buenas prácticas en computación científica 👀 💡 Gestión de datos, programación, c…
RT @RosanaFerrero: 🙌 ¡Optimiza tu investigación! 📚 Aprende buenas prácticas en computación científica 👀 💡 Gestión de datos, programación, c…
RT @RosanaFerrero: 🙌 ¡Optimiza tu investigación! 📚 Aprende buenas prácticas en computación científica 👀 💡 Gestión de datos, programación, c…
RT @RosanaFerrero: 🙌 ¡Optimiza tu investigación! 📚 Aprende buenas prácticas en computación científica 👀 💡 Gestión de datos, programación, c…
RT @RosanaFerrero: 🙌 ¡Optimiza tu investigación! 📚 Aprende buenas prácticas en computación científica 👀 💡 Gestión de datos, programación, c…
RT @RosanaFerrero: 🙌 ¡Optimiza tu investigación! 📚 Aprende buenas prácticas en computación científica 👀 💡 Gestión de datos, programación, c…
RT @RosanaFerrero: 🙌 ¡Optimiza tu investigación! 📚 Aprende buenas prácticas en computación científica 👀 💡 Gestión de datos, programación, c…
RT @RosanaFerrero: 🙌 ¡Optimiza tu investigación! 📚 Aprende buenas prácticas en computación científica 👀 💡 Gestión de datos, programación, c…
RT @gdeandajauregui: Háganse un favor y chequen este artículo, para que su ciencia computacional sea feliz
RT @gdeandajauregui: Háganse un favor y chequen este artículo, para que su ciencia computacional sea feliz
Háganse un favor y chequen este artículo, para que su ciencia computacional sea feliz
RT @RosanaFerrero: 🙌 ¡Optimiza tu investigación! 📚 Aprende buenas prácticas en computación científica 👀 💡 Gestión de datos, programación, c…
RT @RosanaFerrero: 🙌 ¡Optimiza tu investigación! 📚 Aprende buenas prácticas en computación científica 👀 💡 Gestión de datos, programación, c…
RT @RosanaFerrero: 🙌 ¡Optimiza tu investigación! 📚 Aprende buenas prácticas en computación científica 👀 💡 Gestión de datos, programación, c…
RT @RosanaFerrero: 🙌 ¡Optimiza tu investigación! 📚 Aprende buenas prácticas en computación científica 👀 💡 Gestión de datos, programación, c…
RT @RosanaFerrero: 🙌 ¡Optimiza tu investigación! 📚 Aprende buenas prácticas en computación científica 👀 💡 Gestión de datos, programación, c…
RT @RosanaFerrero: 🙌 ¡Optimiza tu investigación! 📚 Aprende buenas prácticas en computación científica 👀 💡 Gestión de datos, programación, c…
RT @RosanaFerrero: 🙌 ¡Optimiza tu investigación! 📚 Aprende buenas prácticas en computación científica 👀 💡 Gestión de datos, programación, c…
RT @RosanaFerrero: 🙌 ¡Optimiza tu investigación! 📚 Aprende buenas prácticas en computación científica 👀 💡 Gestión de datos, programación, c…
RT @RosanaFerrero: 🙌 ¡Optimiza tu investigación! 📚 Aprende buenas prácticas en computación científica 👀 💡 Gestión de datos, programación, c…
RT @RosanaFerrero: 🙌 ¡Optimiza tu investigación! 📚 Aprende buenas prácticas en computación científica 👀 💡 Gestión de datos, programación, c…
RT @RosanaFerrero: 🙌 ¡Optimiza tu investigación! 📚 Aprende buenas prácticas en computación científica 👀 💡 Gestión de datos, programación, c…
RT @RosanaFerrero: 🙌 ¡Optimiza tu investigación! 📚 Aprende buenas prácticas en computación científica 👀 💡 Gestión de datos, programación, c…
RT @RosanaFerrero: 🙌 ¡Optimiza tu investigación! 📚 Aprende buenas prácticas en computación científica 👀 💡 Gestión de datos, programación, c…
RT @RosanaFerrero: 🙌 ¡Optimiza tu investigación! 📚 Aprende buenas prácticas en computación científica 👀 💡 Gestión de datos, programación, c…
🙌 ¡Optimiza tu investigación! 📚 Aprende buenas prácticas en computación científica 👀 💡 Gestión de datos, programación, colaboración, organización de proyectos y más 💻 Maximiza la eficacia y reproducibilidad en tus proyectos 🔗 https://t.co/OZuhaACAai #da
@JorgeGuzmanCBS My go-to recs: https://t.co/UIAXSwy0YT and https://t.co/qvRhO6qUcg
There are so many things I need to care about during the research. Computing, data management, programs, version control, manuscript. This article is so good for me. #PLOSCompBio: Good enough practices in scientific computing https://t.co/QeMUzd03iy
RT @SFGravel: I like the approach of this paper: https://t.co/BUbNL5yIt4
RT @SFGravel: I like the approach of this paper: https://t.co/BUbNL5yIt4
I like the approach of this paper: https://t.co/BUbNL5yIt4
昨日のゼミではWilson, G. et al. (2017) ‘Good enough practices in scientific computing’, https://t.co/QLd72CAzVa. の内容をベースに、研究用プログラムのディレクトリ構造と研究で気をつけるべきことを話した。卒修論に取り組むにあたって実践してほしい。
@martin_hebart You may find the suggestions in the following paper useful: https://t.co/LwAw9ZyKK5
Good Enough Practices In Scientific Computing https://t.co/ja33kYLx2L #planning #computersoftware #controlsystems #datamanagement #metadata #programminglanguages #sourcecode #reproducibility #softwaretools #standardpractices #scientificcomputing #appliedsc
There is great advice available at PLoS: Best Practices for Scientific Computing https://t.co/UqghiT0z0H & Good enough practices in scientific computing https://t.co/E8z8EwQ0nG
A must read for anyone doing data science of any kind.
RT @davorasmussen: Reading this again made me appreciate just how sensible it is. New members of research groups often get hit with "OMG, I…
Reading this again made me appreciate just how sensible it is. New members of research groups often get hit with "OMG, I can't believe you don't do X, Y, Z!" So this is a nice reminder that good practices take time to learn and are rewarded by reuse. https
Ever wondered, what software standards and practices are "good enough" in scientific coding? https://t.co/ooK4RrhFcU
RT @DrClimate: Programming goals as your skills progress: @gvwilson @thecarpentries "Good enough practices in scientific computing" htt…
Programming goals as your skills progress: @gvwilson @thecarpentries "Good enough practices in scientific computing" https://t.co/ufplZTvgfl "Best practices for scientific computing" https://t.co/O6QzUL5Y8i "Twelve quick tips for software design" https
@MaloryO_o En términos de "motivación" recomiendo estos dos artículos de @gvwilson: https://t.co/AKX3XZHr39 https://t.co/6trMgjcLGe
@maximananyev This is more about the standards of reproducible research (can re-run the same code on another computer and get same results) than about specifying the version of the stats program. Not all R users do this either but it’s more common at work.
@gpxl_ It helps to have a bit of formal exposure to OOP and software engineering practices (uni course; MOOC). And just practice & refactoring. Also, there are some resources aimed at coding/data management for scientists, cf. https://t.co/PgyFgRb8nB
@patymardi @CaMo_KIT @MarieHouillon Heavily inspired by the great paper by @gvwilson et al.: https://t.co/TJvkKSbru8 Best practices vs. good enough practices? What’s optimal for research?
@straightedge This one on "Good enough practices" is my all-time fav to get people started https://t.co/UIAXSwPBQr
Hidden curriculum they failed to teach you in grad school, so you had to learn it hard way 5 years after you got your PhD
Finally get to read it again.
@Hao_and_Y @stephlabou @benmarwick This is great! Also Wilson et al 2017 PLoS has info on "best" practices, including how to organize coding projects: https://t.co/6Tknvs9ZUB
@megane_hoover @thompn4 @katyhuff In addition to the book by @katyhuff and @scopatz, I’d recommend “Best Practices in Scientific Computing” (https://t.co/91hZdBqQ62) and “Good Enough Practices for Scientific Computing” (https://t.co/Ps5RqXVHPI) - both are
from the @gvwilson who brought us (empirically tested) "best practices for scientific computing" and "good enough practices in scientific computing", a set of rules for software design: https://t.co/9lZI79JJ6a
@greenprofgreen This article goes beyond file org but adds relevant thoughts re: project organization. In our group we are trying to move more toward a similar system, especially for projects that are more data/analysis heavy: https://t.co/CRJAFC302V
RT @monkmanmh: @TiffanyTimbers "Good enough practices in scientific computing" by @gvwilson @JennyBryan @kcranstn, Justin Kitzes, @lexneder…
@TiffanyTimbers "Good enough practices in scientific computing" by @gvwilson @JennyBryan @kcranstn, Justin Kitzes, @lexnederbragt, @tracykteal #EIKIFJB https://t.co/Y2pGjOw9yI
@AttiasNina Not exactly a tool, but I feel this paper is a required reading for any grad that will be doing some sort of coding: https://t.co/CgXkz58WMV
@startyourlab There was an interesting follow-up to this in 2017 that talked about "good enough" practices - it may help as a stepping stone towards the "best" ones! https://t.co/GHQaX0MC3T
Good practices are important for computing in labs. We have some procedures and written documentation, but they could be improved. https://t.co/OKa5WJZuf0
RT @JoeyBernhardt: Re-upping this gem of a paper on 'Good enough practices for scientific computing' by @gvwilson @JennyBryan and others. H…
RT @JoeyBernhardt: Re-upping this gem of a paper on 'Good enough practices for scientific computing' by @gvwilson @JennyBryan and others. H…
RT @JoeyBernhardt: Re-upping this gem of a paper on 'Good enough practices for scientific computing' by @gvwilson @JennyBryan and others. H…
RT @JoeyBernhardt: Re-upping this gem of a paper on 'Good enough practices for scientific computing' by @gvwilson @JennyBryan and others. H…
Guess I know what we’ll be discussing at an upcoming lab meeting!
RT @JoeyBernhardt: Re-upping this gem of a paper on 'Good enough practices for scientific computing' by @gvwilson @JennyBryan and others. H…
RT @JoeyBernhardt: Re-upping this gem of a paper on 'Good enough practices for scientific computing' by @gvwilson @JennyBryan and others. H…
RT @JoeyBernhardt: Re-upping this gem of a paper on 'Good enough practices for scientific computing' by @gvwilson @JennyBryan and others. H…
RT @JoeyBernhardt: Re-upping this gem of a paper on 'Good enough practices for scientific computing' by @gvwilson @JennyBryan and others. H…
RT @JoeyBernhardt: Re-upping this gem of a paper on 'Good enough practices for scientific computing' by @gvwilson @JennyBryan and others. H…
RT @JoeyBernhardt: Re-upping this gem of a paper on 'Good enough practices for scientific computing' by @gvwilson @JennyBryan and others. H…
RT @JoeyBernhardt: Re-upping this gem of a paper on 'Good enough practices for scientific computing' by @gvwilson @JennyBryan and others. H…
RT @JoeyBernhardt: Re-upping this gem of a paper on 'Good enough practices for scientific computing' by @gvwilson @JennyBryan and others. H…
RT @JoeyBernhardt: Re-upping this gem of a paper on 'Good enough practices for scientific computing' by @gvwilson @JennyBryan and others. H…
RT @JoeyBernhardt: Re-upping this gem of a paper on 'Good enough practices for scientific computing' by @gvwilson @JennyBryan and others. H…
RT @JoeyBernhardt: Re-upping this gem of a paper on 'Good enough practices for scientific computing' by @gvwilson @JennyBryan and others. H…
RT @JoeyBernhardt: Re-upping this gem of a paper on 'Good enough practices for scientific computing' by @gvwilson @JennyBryan and others. H…
RT @JoeyBernhardt: Re-upping this gem of a paper on 'Good enough practices for scientific computing' by @gvwilson @JennyBryan and others. H…
RT @JoeyBernhardt: Re-upping this gem of a paper on 'Good enough practices for scientific computing' by @gvwilson @JennyBryan and others. H…
Looking to organize your collaborative workflow from raw data to publication? Read this stellar paper! If this is "good enough" then I'm not sure what to call the approach I'm currently using 😅